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Table 3 Allelic profiles of the seven housekeeping genes used in MLST analysis

From: Exploration of genetic diversity of Bacillus spp. from industrial shrimp ponds in Vietnam by multi-locus sequence typing

Gene Size of fragment analyzed Coverage of complete CDS (%) Number of alleles Number of polymorphic sites Percentage of polymorphic sites Avg G + C content (%) DI dN/dS ratio
glpF 384 46.6 18 146 38.0 50.0 0.972 0.061
ilvD 470 28.0 16 164 34.9 54.5 0.957 0.040
pta 414 42.6 15 105 25.4 51.4 0.942 0.020
purH 399 25.9 17 137 34.3 50.4 0.96 0.080
pycA 399 11.6 19 168 42.1 49.6 0.966 0.048
rpoD 384 34.4 11 108 28.1 49.2 0.908 0.001
tpiA 420 55.1 13 89 21.2 49.3 0.932 0.041
  1. DI discrimination index