Table 4 The percentages of differentially expressed (DE) contigs annotated by BLAST2GO from each library comparison, as well as the percentages of DE contigs assigned GO annotations by BLAST2GO. The percentages of GO-annotated contigs from each of the primary categories biological processes, molecular function, and cellular components, as well as the three most populated secondary categories
Library comparison | Percent of DE contigs with significant hits (evalue < 1e−10) (%) | Percent of DE contigs assigned GO annotations (%) | Primary categories | Secondary categories |
|---|---|---|---|---|
FSg3 × FSg6 | 41 | 92 | 33% biological processes 38% molecular function 29% cellular components | 13% metabolic processes 11% catalytic activity 11% cellular processes |
FSg3 × DPg3 | 62 | 55 | 39% biological processes 20% molecular function 41% cellular components | 45% metabolic processes 44% cellular processes 42% cell function |
FSg6 × DPg3 | 60 | 47 | 37% biological processes 24% molecular functions 39% cellular components | 46% metabolic processes 44% cellular processes 40% cell function FDR40) cell parts |