Table 3 The percentages of differentially expressed (DE) contigs annotated by the KEGG Automatic Annotation System (KAAS) from each library comparison, as well as the total number of pathways contigs were assigned to, and the percentages of DE contigs in the top three pathways with the most contigs
Library Comparison | Percent of DE contigs annotated (%) | Number of pathways | Percent of DE Contigs in top three pathways |
|---|---|---|---|
FSg3 × FSg6 | 21 | 59 | 25% metabolic pathways 21% ribosome 13% microbial metabolism in diverse environments |
FSg3 × DPg3 | 42 | 165 | 30% metabolic processes 19% ribosomal pathways 15% biosynthesis of secondary metabolites |
FSg6 × DPg3 | 37 | 157 | 29% metabolic pathways 19% ribosome-related genes 14% biosynthesis of secondary metabolites |